BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017C09LP1|AL427139
(999 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1915 0.0
3x_Contig66 918 0.0
>3x_Contig1530
Length = 6216
Score = 1915 bits (964), Expect = 0.0
Identities = 993/1000 (99%), Gaps = 3/1000 (0%)
Strand = Plus / Plus
Query: 1 gatcctaagagatggggaagctccgtttcaaaggcctaattttctaggccaccatcgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3566 gatcctaagagatggggaagctccgtttcaaaggcctaattttctaggccaccatcgaaa 3625
Query: 61 gggaatccggttaatattccggaacctggatatggattcttcacggtaacgtaactgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3626 gggaatccggttaatattccggaacctggatatggattcttcacggtaacgtaactgaat 3685
Query: 121 gtggagacgtcggcgcgagcc-tgggaggagttatcttttcttcttaacagcttatcacc 179
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3686 gtggagacgtcggcgcgagccctgggaggagttatcttttcttcttaacagcttatcacc 3745
Query: 180 ccggaattggtttatccggagagggggtcttatggctggaagagcccagcccttgtgctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3746 ccggaattggtttatccggagagggggtcttatggctggaagagcccagcccttgtgctg 3805
Query: 240 ggtccggtgcgcccgcgacggcccttgaaaatccacaggaaggaatagttttcatgccag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3806 ggtccggtgcgcccgcgacggcccttgaaaatccacaggaaggaatagttttcatgccag 3865
Query: 300 gtcgtactgataaccgcagcaggtctccaaggtgaacagcctctagttgatagaataatg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3866 gtcgtactgataaccgcagcaggtctccaaggtgaacagcctctagttgatagaataatg 3925
Query: 360 tagataagggaagtcggcaaaatagatccgtaacttcgggataaggattggctctaagga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3926 tagataagggaagtcggcaaaatagatccgtaacttcgggataaggattggctctaagga 3985
Query: 420 tcgggcagtgagggccttggtcagacgcggcgggcatgcttgtggactgtcttactgggc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3986 tcgggcagtgagggccttggtcagacgcggcgggcatgcttgtggactgtcttactgggc 4045
Query: 480 ttgctcggtgggacggactgcttgcgggccttgtcgtaga-ggccttggtaggtctcttg 538
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4046 ttgctcggtgggacggactgcttgcgggccttgtcgtagacggccttggtaggtctcttg 4105
Query: 539 tagaccgtcgcttgctgcaattaacgatcaacttagaactggtacggacaaggggaatct 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4106 tagaccgtcgcttgctgcaattaacgatcaacttagaactggtacggacaaggggaatct 4165
Query: 599 gactgtctaattaaaacatagcattgcgatggtcagaaagtgatgttgacgcaatgtgat 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4166 gactgtctaattaaaacatagcattgcgatggtcagaaagtgatgttgacgcaatgtgat 4225
Query: 659 ttctgcccagtgctctgaatgtcaaagtgaagaaattcaaccaagcgcgggtaaacggcg 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4226 ttctgcccagtgctctgaatgtcaaagtgaagaaattcaaccaagcgcgggtaaacggcg 4285
Query: 719 ggagtwactatgactctcttaaggtagccaaatgcctcgtcatctaattagtgacgcgca 778
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4286 ggagtaactatgactctcttaaggtagccaaatgcctcgtcatctaattagtgacgcgca 4345
Query: 779 tgaatggattaacgagattcccactgtccctatctactatctagcgaaaccacagccaag 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4346 tgaatggattaacgagattcccactgtccctatctactatctagcgaaaccacagccaag 4405
Query: 839 ggaacgggcttggcagaatcagcggggaaagaagaccctgttgagcttgactctagtttg 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4406 ggaacgggcttggcagaatcagcggggaaagaagaccctgttgagcttgactctagtttg 4465
Query: 899 acaattgtgaagagacawagagggtgtagcataagttggagcttcggcgccagttaaata 958
|| |||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 4466 ac-attgtgaagagacatagagggtgtagcataagtgggagcttcggcgccagtgaaata 4524
Query: 959 ccactacctttatagtttctttacttattcaattaagcgg 998
||||||||||||||||||||||||||||||||||||||||
Sbjct: 4525 ccactacctttatagtttctttacttattcaattaagcgg 4564
>3x_Contig66
Length = 1023
Score = 918 bits (462), Expect = 0.0
Identities = 476/478 (99%), Gaps = 2/478 (0%)
Strand = Plus / Minus
Query: 151 ttatcttttcttcttaacagcttatcaccccggaattggtttatccggagagggggtctt 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttatcttttcttcttaacagcttatcaccccggaattggtttatccggagagggggtctt 422
Query: 211 atggctggaagagcccagcccttgtgctgggtccggtgcgcccgcgacggcccttgaaaa 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atggctggaagagcccagcccttgtgctgggtccggtgcgcccgcgacggcccttgaaaa 362
Query: 271 tccacaggaaggaatagttttcatgccaggtcgtactgataaccgcagcaggtctccaag 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccacaggaaggaatagttttcatgccaggtcgtactgataaccgcagcaggtctccaag 302
Query: 331 gtgaacagcctctagttgatagaataatgtagataagggaagtcggcaaaatagatccgt 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgaacagcctctagttgatagaataatgtagataagggaagtcggcaaaatagatccgt 242
Query: 391 aacttcgggataaggattggctctaaggatcgggcagtgagggccttggtcagacgcggc 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacttcgggataaggattggctctaaggatcgggcagtgagggccttggtcagacgcggc 182
Query: 451 gggcatgcttgtggactgtcttactgggcttgctcggtgggacggactgcttgcgggcct 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggcatgcttgtggactgtcttactgggcttgctcggtgggacggactgcttgcgggcct 122
Query: 511 tgtcgtaga-ggccttggtaggtctcttgtagaccgtcgcttgctgcaattaacgatcaa 569
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtcgtagacggccttggtaggtctcttgtagaccgtcgcttgctgcaattaacgatcaa 62
Query: 570 cttagaactggtacgga-caaggggaatctgactgtctaattaaaacatagcattgcg 626
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttagaactggtacggaccaaggggaatctgactgtctaattaaaacatagcattgcg 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4268
Number of Sequences: 1807
Number of extensions: 4268
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 2
length of query: 999
length of database: 10,358,551
effective HSP length: 16
effective length of query: 983
effective length of database: 10,329,639
effective search space: 10154035137
effective search space used: 10154035137
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)